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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs7162749 chr15:40848984 C/T 0.000214 67 27.88 24.87 16.78 KM Plot
UVM rs7165054 chr15:40857883 T/G 0.000227 67 27.87 26.12 16.78 KM Plot
UVM rs7166991 chr15:40671957 A/G 3.63E-7 67 26.55 26.12 1.27 KM Plot
UVM rs71894775 chr20:30335239 CTCTG/C 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs7269370 chr20:30422511 T/A 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs7270207 chr20:30320883 G/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs7297253 chr12:132568660 A/G 3.4E-7 67 31.83 23.25 0.73 KM Plot
UVM rs729838 chr20:30263528 G/A 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs72987166 chr2:239020155 G/A 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs7299476 chr12:132603579 T/C 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs7299738 chr12:9813095 T/C 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs7302110 chr12:9809062 A/G 0.000112 67 27.62 21.8 7.6 KM Plot
UVM rs7302746 chr12:9809533 A/G 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs7303246 chr12:9772584 A/G 0.000118 66 7.6 22.33 27.62 KM Plot
UVM rs7304321 chr12:9814176 T/A 0.000125 67 27.88 21.8 7.6 KM Plot